chuiqin / irGSEA

The integration of single cell rank-based gene set enrichment analysis
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Errors when running irGSEA.upset #4

Open Jonathanyu2014 opened 2 years ago

Jonathanyu2014 commented 2 years ago

I ran irGSEA.upset using example data. The command was "irGSEA.upset(object = result.dge, method = "UCell")". The error was as follows:

Error in if (as.character(ta_call[[1]]) == "upset_top_annotation") { : the condition has length > 1

ps. irGSEA v1.1.2 and UCell 1.99.6 and R v4.2.0α on win10

chuiqin commented 2 years ago

如果不介意的话,你是否可以把result.dge打包成一个rds文件,通过百度云链接传递给我?又或者可以加我微信号fcq065837,让我可以测试一下是数据文件问题,还是R包代码问题。


发件人: Qichao Yu @.> 发送时间: 2022年4月1日 17:57 收件人: chuiqin/irGSEA @.> 抄送: Subscribed @.***> 主题: [chuiqin/irGSEA] Errors when running irGSEA.upset (Issue #4)

I ran irGSEA.upset using example data. The command was "irGSEA.upset(object = result.dge, method = "UCell")". The error was as follows:

Error in if (as.character(ta_call[[1]]) == "upset_top_annotation") { : the condition has length > 1

ps. irGSEA v1.1.2 and UCell 1.99.6 and R v4.2.0α on win10

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DrZhaoJie commented 1 year ago

楼主您好,我遇到了这个同学一样的error,跑的是您和您教程里一样的pbmc数据集