Integrate HGNC resources

churchmanlab / genewalk

GeneWalk identifies relevant gene functions for a biological context using network representation learning

https://churchman.med.harvard.edu/genewalk

BSD 2-Clause "Simplified" License

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Integrate HGNC resources #36

Closed bgyori closed 3 years ago

bgyori commented 3 years ago

This PR adds an HGNC resource download to the ResourceManager, and implements a GeneMapper class to do all necessary mappings in a self-contained way within GeneWalk. This makes INDRA an optional dependency which needs to be installed only if an INDRA-sourced network is used as input.