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cidgoh / DataHarmonizer

A standardized browser-based spreadsheet editor and validator that can be run offline and locally, and which includes templates for SARS-CoV-2 and Monkeypox sampling data. This project, created by the Centre for Infectious Disease Genomics and One Health (CIDGOH), at Simon Fraser University, is now an open-source collaboration with contributions from the National Microbiome Data Collaborative (NMDC), the LinkML development team, and others.
MIT License
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CNPHI Export - Multiple Symptom Export #114

Closed cmrn-rhi closed 3 years ago

cmrn-rhi commented 4 years ago

Data Harmonizer is separating multiple symptoms by ; but CNPHI import requires entries be separated by ~.

ddooley commented 4 years ago

Looks like that the only multiselect field at moment. It looks like we should add another parameter, a "separator" field, for export formats, assuming same separator is used throughout the output's multi-selects.

cmrn-rhi commented 4 years ago

Based on what the CNPHI LaSER Upload Guide says, I think that applies throughout the output's multi-selects.

ddooley commented 3 years ago

~ is implemente on signs and symptoms field now. No other multi-select fields are brought into CNPHI export.