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cidgoh / DataHarmonizer

A standardized browser-based spreadsheet editor and validator that can be run offline and locally, and which includes templates for SARS-CoV-2 and Monkeypox sampling data. This project, created by the Centre for Infectious Disease Genomics and One Health (CIDGOH), at Simon Fraser University, is now an open-source collaboration with contributions from the National Microbiome Data Collaborative (NMDC), the LinkML development team, and others.
MIT License
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PHA4GE template: reorder fields in GenBank export #180

Closed griffie closed 3 years ago

griffie commented 3 years ago

Can we please reorder the fields in Genbank export from the PHA4GE template to resemble the submission form?

They should be in this order please: biosample_accession sample_name assembly_method assembly_method_version genome_coverage sequencing_technology reference_genome filename

ddooley commented 3 years ago

The current DataHarmonizer template has an extra field "assembly_name" ? Is that still desired?

griffie commented 3 years ago

Good catch! No, we don't want that I don't think. I just removed it.

ddooley commented 3 years ago

ok, done in draft