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cidgoh / DataHarmonizer

A standardized browser-based spreadsheet editor and validator that can be run offline and locally, and which includes templates for SARS-CoV-2 and Monkeypox sampling data. This project, created by the Centre for Infectious Disease Genomics and One Health (CIDGOH), at Simon Fraser University, is now an open-source collaboration with contributions from the National Microbiome Data Collaborative (NMDC), the LinkML development team, and others.
MIT License
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Adding SOP for PHA4GE template in DataHarmonizer and website #195

Closed griffie closed 3 years ago

griffie commented 3 years ago

The CanCOGeN SOP is a bit different compared to the PHA4GE SOP. Can we make the PHA4GE SOP available in the Help section when someone selects the PHA4GE template? The pdf is attached.

PHA4GE DataHarmonizer Manual_1.0.pdf

Can we also make the link more publicly available/give it a permanent home rather than just in my google docs? i.e. can we link the doc on in a PHA4GE section on the Wiki? https://docs.google.com/document/d/1SwGU7qS9EL6V-r4OUKzjCrUYb6Fqwg6l2lrennWZ_GY/edit?usp=sharing

cmrn-rhi commented 3 years ago

PHA4GE SOP is now associated the corresponding template: https://github.com/Public-Health-Bioinformatics/DataHarmonizer/blob/master/template/pha4ge/SOP.pdf

And it has also been linked to in the PHA4GE wiki: https://github.com/Public-Health-Bioinformatics/DataHarmonizer/wiki/PHA4GE-SARS-CoV-2-Template