A standardized browser-based spreadsheet editor and validator that can be run offline and locally, and which includes templates for SARS-CoV-2 and Monkeypox sampling data. This project, created by the Centre for Infectious Disease Genomics and One Health (CIDGOH), at Simon Fraser University, is now an open-source collaboration with contributions from the National Microbiome Data Collaborative (NMDC), the LinkML development team, and others.
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What are DataHarmonizer's reserved field names? #313
I had been using source in some of my LinkML inputs, but that resulted in broken interfaces, as DH seems to expect source to say something about select lists.
Could there be other conflicts between the attribute names allowed for LinkML slots and DH expectations?
Source shouldn't be a problem any more. However, I will make an effort to document any "magic" field names now, and we can consider adding a prefix to make collisions unlikely.
I had been using
source
in some of my LinkML inputs, but that resulted in broken interfaces, as DH seems to expectsource
to say something about select lists.Could there be other conflicts between the attribute names allowed for LinkML
slot
s and DH expectations?