A standardized browser-based spreadsheet editor and validator that can be run offline and locally, and which includes templates for SARS-CoV-2 and Monkeypox sampling data. This project, created by the Centre for Infectious Disease Genomics and One Health (CIDGOH), at Simon Fraser University, is now an open-source collaboration with contributions from the National Microbiome Data Collaborative (NMDC), the LinkML development team, and others.
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Allow `getDataObjects` to include data that doesn't conform to column types #352
This adds a strict option to both DataHarmonizer.getDataObjects and the dataArrayToObject utility function in fields.js. If strict is true (the default if not provided) there is no change in behavior. If strict is false column datatypes are not used to parse table values. This means that the value "xyz" will be included even if it was entered in an integer column. Necessarily, all values will be strings if strict is false.
This adds a
strictoption to bothDataHarmonizer.getDataObjectsand thedataArrayToObjectutility function infields.js. Ifstrictistrue(the default if not provided) there is no change in behavior. Ifstrictisfalsecolumn datatypes are not used to parse table values. This means that the value "xyz" will be included even if it was entered in an integer column. Necessarily, all values will be strings ifstrictisfalse.Fixes #350