A data specification for harmonizing One Health AMR pathogen genomics contextual data. The specification provides standardized (ontology-based) fields and terms which are implemented via a spreadsheet collection template, supported by field and reference guides as well as different curation and new term request SOPs.
A species of facultatively anaerobic, Gram negative, curved rod shaped bacteria assigned to the phylum Proteobacteria. This species is motile, oxidase and lysine decarboxylase positive, hemolytic, halophilic and can use a wide variety of sugars as carbon sources. V. parahaemolyticus is a marine organism and a pathogen that causes gastroenteritis and wound infections.
Proposed Term Label
Vibrio parahaemolyticus [NCIT:C86846]
Proposed Associated Field(s)
organism
Definition/Description
A species of facultatively anaerobic, Gram negative, curved rod shaped bacteria assigned to the phylum Proteobacteria. This species is motile, oxidase and lysine decarboxylase positive, hemolytic, halophilic and can use a wide variety of sugars as carbon sources. V. parahaemolyticus is a marine organism and a pathogen that causes gastroenteritis and wound infections.
Definition Source
No response
Guidance
No response
Alternative labels and/or synonyms
No response
Additional Comments (not an annotation)
Definition from the NCIT term definition.
Optional - Contributor Attribution
No response