Mutation index has some integers in mutation name column

cidgoh / nf-ncov-voc

A Nextflow wrapped workflow for generating the mutation profiles of SARS-CoV-2 genomes (Variants of Concern and Variants of Interest). Workflow is developed in collaboration with COVID-MVP (https://github.com/cidgoh/COVID-MVP) which can be used to visualize the mutation profiles and functional annotations.

MIT License

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Mutation index has some integers in mutation name column #150

Open miseminger opened 7 months ago

miseminger commented 7 months ago

See January 19, 2024 index version. 40 mutation names are numeric. I checked a few and they were artifacts from the GVFs: eg. "Name=1275" for XBB.1.5.62, ln 32.

miseminger commented 7 months ago

numeric_mutation_names_Jan19index.csv

The affected part of the index is extracted into this CSV.