A Nextflow wrapped workflow for generating the mutation profiles of SARS-CoV-2 genomes (Variants of Concern and Variants of Interest). Workflow is developed in collaboration with COVID-MVP (https://github.com/cidgoh/COVID-MVP) which can be used to visualize the mutation profiles and functional annotations.
MIT License
6
stars
5
forks
source link
Add recombinat lineages (XD, XE) to constellation os lineages & variants tracke and add support for surveillance reports of recombinant lineages #95
Is your feature request related to a problem? Please describe.
The new naming convention of recombinant lineages XD, XE are not supported by the current version of surveillance module
Is your feature request related to a problem? Please describe. The new naming convention of recombinant lineages XD, XE are not supported by the current version of surveillance module