cio-abcd / variantinterpretation

Collaborative Interpretation-Pipeline workflow based on nf-core pipeline structure
MIT License
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Samtools dict stops with fasta filenames containg dots #42

Closed sci-kai closed 1 month ago

sci-kai commented 2 months ago

Description of the bug

Samtools dict produces and error if the filename of the FASTA file contains additional dots. Fixing this n eeds a change in retrieving the Basename of the file, making it more applicable to a variety of filename.

Command used and terminal output

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Relevant files

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System information

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