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cirisjl / Machine-learning-development-environment-for-single-cell-sequencing-data-analyses

Machine learning development environment for single-cell sequencing data analyses
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Fix the installation Issue of CIDR package and its dependent package 'clusterCrit' #19

Open karthikgou opened 1 year ago

karthikgou commented 1 year ago

When we run the evaluation code, there is a package installation issue in R. The R package CIDR is not installing correctly because the dependent package of CIDR which is the clusterCrit package is not available in any CRAN Repositories

Here are the details about the error when running evaluation API: image

Tried installing the R packages as follows: image

It didn't work out, after debugging in the celery-api docker container by opening an R shell inside it, found the below observations: image

I tried installing clusterCrit package as well but it’s throwing the below error image

I got this from google image