Open boennecd opened 1 year ago
The package does not build with pip using --use-pep517 with poetry. This is mainly an issue as the flag cannot be disabled with poetry (see https://github.com/python-poetry/poetry/issues/3433).
--use-pep517
A reproducible example is given below:
mkdir tmp cd tmp poetry init # click through steps... poetry add glmnet > Using version ^2.2.1 for glmnet > > Updating dependencies > Resolving dependencies... (0.1s) > > Writing lock file > > Package operations: 6 installs, 0 updates, 0 removals > > • Installing numpy (1.23.3) > • Installing joblib (1.2.0) > • Installing scipy (1.9.2) > • Installing threadpoolctl (3.1.0) > • Installing scikit-learn (1.1.2) > • Installing glmnet (2.2.1): Failed > > CalledProcessError > > ... > > Installing build dependencies: started > Installing build dependencies: finished with status 'done' > Getting requirements to build wheel: started > Getting requirements to build wheel: finished with status 'error' > error: subprocess-exited-with-error > > × Getting requirements to build wheel did not run successfully. > │ exit code: 1 > ╰─> [2 lines of output] > install requires: 'numpy'. use pip or easy_install. > $ pip install numpy > [end of output]
The error comes from the beginning of the setup.py file: https://github.com/civisanalytics/python-glmnet/blob/813c06f5fcc9604d8e445bd4992f53c4855cc7cb/setup.py#L12-L18
which seems to use this SO answer to compile the FORTRAN code from the original R package: https://stackoverflow.com/a/55358607/5861244
A solution in the short term is to call
poetry run python -m pip install glmnet --no-use-pep517 poetry add glmnet
as mentioned here: https://github.com/python-poetry/poetry/issues/3433#issuecomment-840509576
Versions for completness:
poetry run python --version > Python 3.10.7 poetry --version > Poetry (version 1.2.0)
The package does not build with pip using
--use-pep517
with poetry. This is mainly an issue as the flag cannot be disabled with poetry (see https://github.com/python-poetry/poetry/issues/3433).A reproducible example is given below:
The error comes from the beginning of the setup.py file: https://github.com/civisanalytics/python-glmnet/blob/813c06f5fcc9604d8e445bd4992f53c4855cc7cb/setup.py#L12-L18
which seems to use this SO answer to compile the FORTRAN code from the original R package: https://stackoverflow.com/a/55358607/5861244
A solution in the short term is to call
as mentioned here: https://github.com/python-poetry/poetry/issues/3433#issuecomment-840509576
Versions for completness: