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cjneely10 / EukMetaSanity

Structural and functional annotation of eukaryotic metagenome-assembled genomes
GNU General Public License v3.0
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Unable to locate input directory #11

Closed JSSaini closed 2 years ago

JSSaini commented 2 years ago

yapim run -i 13m_164.fa -c run-config.yaml -p $EukMS_run -o Eukmeta_unrefined

Unable to locate input directory

Could you please help me in diagnosing this error? Thanks.

edgraham commented 2 years ago

I'm fairly sure this error is because the -i parameter is looking for a directory and you are providing it with a fasta file. So make a directory called "genome" and place the 13m_164.fa file into it and then call it with '-i genome'.