unable to find pipeline.pkl file when call pipeline

[shanexuuu]

Hi, when I try to run "refine" or "report" module with:

conda activate EukMS_report
cp $EukMS_report/report-config.yaml ./
yapim run -i input_maxbin2 -c report-config.yaml -p $EukMS_report

It says "Unable to find pipeline .pkl file".

However, it works in "run" module with:

conda activate EukMS_run
cp $EukMS_run/run-config.yaml ./
yapim run -i input_maxbin2 -c run-config.yaml -p $EukMS_run
conda deactivate

For more information, I wrote to my ~/.bashrc with:

export EukMS_run=/home/w/EukMetaSanity/bin/run-pipeline
export EukMS_report=/home/w/EukMetaSanity/bin/report-pipeline
export EukMS_refine=/home/w/EukMetaSanity/bin/refine-pipeline

And already source ~/.bashrc and close the shell window.

Would anyone have any suggestion for this issue? @cjneely10

Many thanks!