ckmah / bento-tools

A Python toolkit for subcellular analysis of spatial transcriptomics data
https://bento-tools.readthedocs.io/en/latest/
BSD 2-Clause "Simplified" License
56 stars 6 forks source link

v2.1.1 #128

Closed ckmah closed 3 months ago

ckmah commented 3 months ago

Improve robustness and runtime performance after initial SpatialData refactor.

Stability

Bugs

notion-workspace[bot] commented 3 months ago

Bento v2.1.1

codecov[bot] commented 3 months ago

Codecov Report

Attention: Patch coverage is 29.39815% with 305 lines in your changes missing coverage. Please review.

Project coverage is 23.71%. Comparing base (ed851d1) to head (8237e35). Report is 172 commits behind head on master.

:exclamation: Current head 8237e35 differs from pull request most recent head b664b70

Please upload reports for the commit b664b70 to get more accurate results.

Files Patch % Lines
tests/test_ut.py 10.00% 54 Missing :warning:
bento/tools/_flux.py 10.52% 34 Missing :warning:
tests/test_flux.py 21.05% 30 Missing :warning:
bento/plotting/_plotting.py 30.00% 28 Missing :warning:
bento/tools/_point_features.py 22.22% 21 Missing :warning:
tests/test_colocation.py 17.39% 19 Missing :warning:
bento/_utils.py 6.25% 15 Missing :warning:
tests/test_io.py 28.57% 15 Missing :warning:
bento/tools/_lp.py 0.00% 14 Missing :warning:
tests/test_shape_features.py 30.00% 14 Missing :warning:
... and 11 more
Additional details and impacted files ```diff @@ Coverage Diff @@ ## master #128 +/- ## =========================================== - Coverage 71.84% 23.71% -48.14% =========================================== Files 35 37 +2 Lines 2252 2218 -34 =========================================== - Hits 1618 526 -1092 - Misses 634 1692 +1058 ```

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