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ckmah / bento-tools

A Python toolkit for subcellular analysis of spatial transcriptomics data
https://bento-tools.readthedocs.io/en/latest/
BSD 2-Clause "Simplified" License
56 stars 6 forks source link

patch bugs affecting tutorials #98

Closed ckmah closed 1 year ago

ckmah commented 1 year ago
codecov-commenter commented 1 year ago

Codecov Report

Patch coverage: 90.97% and project coverage change: +1.82 :tada:

Comparison is base (d64c875) 70.01% compared to head (fa70926) 71.84%.

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Additional details and impacted files ```diff @@ Coverage Diff @@ ## v2.0 #98 +/- ## ========================================== + Coverage 70.01% 71.84% +1.82% ========================================== Files 34 35 +1 Lines 2158 2252 +94 ========================================== + Hits 1511 1618 +107 + Misses 647 634 -13 ``` | [Impacted Files](https://codecov.io/gh/ckmah/bento-tools/pull/98?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Clarence+Mah) | Coverage Δ | | |---|---|---| | [bento/datasets/\_datasets.py](https://codecov.io/gh/ckmah/bento-tools/pull/98?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Clarence+Mah#diff-YmVudG8vZGF0YXNldHMvX2RhdGFzZXRzLnB5) | `22.22% <ø> (ø)` | | | [bento/plotting/\_multidimensional.py](https://codecov.io/gh/ckmah/bento-tools/pull/98?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Clarence+Mah#diff-YmVudG8vcGxvdHRpbmcvX211bHRpZGltZW5zaW9uYWwucHk=) | `53.42% <0.00%> (ø)` | | | [bento/\_utils.py](https://codecov.io/gh/ckmah/bento-tools/pull/98?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Clarence+Mah#diff-YmVudG8vX3V0aWxzLnB5) | `74.64% <66.66%> (-1.30%)` | :arrow_down: | | [bento/tools/\_point\_features.py](https://codecov.io/gh/ckmah/bento-tools/pull/98?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Clarence+Mah#diff-YmVudG8vdG9vbHMvX3BvaW50X2ZlYXR1cmVzLnB5) | `97.97% <90.47%> (-0.60%)` | :arrow_down: | | [bento/tools/\_shape\_features.py](https://codecov.io/gh/ckmah/bento-tools/pull/98?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Clarence+Mah#diff-YmVudG8vdG9vbHMvX3NoYXBlX2ZlYXR1cmVzLnB5) | `84.70% <91.66%> (+19.05%)` | :arrow_up: | | [bento/tools/\_lp.py](https://codecov.io/gh/ckmah/bento-tools/pull/98?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Clarence+Mah#diff-YmVudG8vdG9vbHMvX2xwLnB5) | `39.16% <100.00%> (ø)` | | | [tests/test\_point\_features.py](https://codecov.io/gh/ckmah/bento-tools/pull/98?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Clarence+Mah#diff-dGVzdHMvdGVzdF9wb2ludF9mZWF0dXJlcy5weQ==) | `100.00% <100.00%> (ø)` | | | [tests/test\_shape\_features.py](https://codecov.io/gh/ckmah/bento-tools/pull/98?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Clarence+Mah#diff-dGVzdHMvdGVzdF9zaGFwZV9mZWF0dXJlcy5weQ==) | `100.00% <100.00%> (ø)` | |

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