Depending on the availability of additional information (such as coverage; length is trivially available), it would be good to have the functionality to respect this in the plotting.
Ideas include using point size, transparency, color, shape to reflect different things. Length could be point size, coverage could be transparency. Sequences with particular functions could be depicted as star-like shapes.
We will need to define how the user can/should provide this information and how the different information sources (coverage, function, etc.) will then get represented.
Depending on the availability of additional information (such as coverage; length is trivially available), it would be good to have the functionality to respect this in the plotting. Ideas include using point size, transparency, color, shape to reflect different things. Length could be point size, coverage could be transparency. Sequences with particular functions could be depicted as star-like shapes. We will need to define how the user can/should provide this information and how the different information sources (coverage, function, etc.) will then get represented.