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clairelbromley / ZebrafishKymographing

Various software tools written for analysis of lumen opening and membrane retraction in zebrafish.
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Problems with cziFig: unable to use "both" to do both upwards and downwards kymographs #110

Open clairelbromley opened 7 years ago

clairelbromley commented 7 years ago

Error when using cziFig to do kymo in both directions - it seems to be unable to do both the downward and upward kymographs

screen shot 2017-08-08 at 14 45 45

Error using handle.handle/set Invalid or deleted object.

Error in firstFigure (line 36) set(uO.figHandle, 'Name', title_txt,'NumberTitle','off');

Error in cziFig>buttonGenerateKym_Callback (line 303) firstFigure(squeeze(stack(:,:,1)), curr_metadata, userOptions);

Error in gui_mainfcn (line 95) feval(varargin{:});

Error in cziFig (line 42) gui_mainfcn(gui_State, varargin{:});

Error in @(hObject,eventdata)cziFig('buttonGenerateKym_Callback',hObject,eventdata,guidata(hObject))

Error while evaluating uicontrol Callback

BUT then when I tried on the same file to generate a kymograph just in one direction, the following error message appeared, which had not appeared previously Loading frame 273 of 273 Error using handle.handle/set Invalid or deleted object.

Error in firstFigure (line 36) set(uO.figHandle, 'Name', title_txt,'NumberTitle','off');

Error in cziFig>buttonGenerateKym_Callback (line 303) firstFigure(squeeze(stack(:,:,1)), curr_metadata, userOptions);

Error in gui_mainfcn (line 95) feval(varargin{:});

Error in cziFig (line 42) gui_mainfcn(gui_State, varargin{:});

Error in @(hObject,eventdata)cziFig('buttonGenerateKym_Callback',hObject,eventdata,guidata(hObject))

Error while evaluating uicontrol Callback

HOWEVER this new error doesn't appear after restarting matlab completely