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clairelbromley / ZebrafishKymographing

Various software tools written for analysis of lumen opening and membrane retraction in zebrafish.
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URGENT temp files not being saved #58

Closed clairelbromley closed 7 years ago

clairelbromley commented 7 years ago

Temp files were no longer saved following a change to the code screen shot 2016-12-14 at 16 28 11 Commenting out the above lines means files are now saved in the tmp directory again (there were none in there before commenting out this section)

clairelbromley commented 7 years ago

Also, the .csv file that I thought had saved following the crash is a mess: as in the values all seem to be in the wrong boxes? Might be worth looking into whether the .csv is saving correctly at somepoint

https://drive.google.com/file/d/0B5BMTPgxKjfcWlF1MS00UmpEc1U/view?usp=sharing

clairelbromley commented 7 years ago

temp files aren't saved even after commenting out code Seem to be deleted either after closing down matlab or restarting laptop (not sure which)

clairelbromley commented 7 years ago

Following on from the changes made last night, I can't seem to find the autosave files anywhere on the computer....

clairelbromley commented 7 years ago

Also - testing out the original file save in the tmp directory, it appears that the files remain in the tmp directory until the computer is restarted (which I had to do yday). Exiting and reopening matlab does not remove the tmp files

clairelbromley commented 7 years ago

Finally (note the above comment too) - it seems that even after the change that you made to the autosave function last night, temp files are still being saved to the mac tmp folder (private/tmp)

clairelbromley commented 7 years ago

Also - the below warning comes up when opening the viewer - unsure if it's relevant, but figured that I should paste it in just in case!

viewerMain Warning: Directory already exists. In viewerMain>viewerMain_OpeningFcn at 106 In gui_mainfcn at 220 In viewerMain at 42 Warning: Inputs must be character arrays or cell arrays of strings. In viewerMain>viewerMain_OpeningFcn at 112 In gui_mainfcn at 220 In viewerMain at 42 190716

dougkelly88 commented 7 years ago

7f38df928e61d24c536e735135026726b657ec98 should deal with the last comment but one - stupid mistake on my part. Last comment is nothing to worry about, I can suppress the warning if it's annoying.

clairelbromley commented 7 years ago

Files now saved in home directory

Is it the case that it is set up to save details about each embryo when you move to the next one? OR does it save after a certain time interval?

dougkelly88 commented 7 years ago

Should update when you change embryo on left hand list box

On 20 Dec 2016 10:22 am, "clairelbromley" notifications@github.com wrote:

Files now saved in home directory

Is it the case that it is set up to save details about each embryo when you move to the next one? OR does it save after a certain time interval?

— You are receiving this because you were assigned. Reply to this email directly, view it on GitHub https://github.com/clairelbromley/ZebrafishKymographing/issues/58#issuecomment-268207336, or mute the thread https://github.com/notifications/unsubscribe-auth/ADxBsEv2dHafjVIKC0N2gvC5Y_ylaGt4ks5rJ6xWgaJpZM4LNII0 .

clairelbromley commented 7 years ago

Yep - that's exactly what happens :)

Also - the files remain after computer shut down and restart :) so looking good!