search

clairelbromley / ZebrafishKymographing

Various software tools written for analysis of lumen opening and membrane retraction in zebrafish.
1 stars 0 forks source link

Some of the raw data has not been processed #68

Closed clairelbromley closed 7 years ago

clairelbromley commented 7 years ago

Data that has been missed in the processing: 240815 E8C3, E14C3, E15C2

Date: 240815, Embryo: 8, cut: 3 file: '/Applications/MATLAB_R2014a.app/toolbox/matlab/imagesci/imread.m' name: 'imread' line: 349

file: '/Users/clairebromley/ClaireDataAnalysis/MATLAB/kymographBase.m'
name: 'kymographBase'
line: 166

file: '/Users/clairebromley/ClaireDataAnalysis/MATLAB/kymographUpDownWrapper.m'
name: 'kymographUpDownWrapper'
line: 4

Error: MATLAB:imagesci:imread:fileDoesNotExist: File "/Volumes/Arthur/DATA etc/CUTS/Vienna 1/DATA Vienna 1/Cut data/USE raw SORT/PUT BACK/240815_E8/001136_mix.tif" does not exist.

... Date: 240815, Embryo: 15, cut: 2 file: '/Applications/MATLAB_R2014a.app/toolbox/matlab/imagesci/imread.m' name: 'imread' line: 349

file: '/Users/clairebromley/ClaireDataAnalysis/MATLAB/kymographBase.m'
name: 'kymographBase'
line: 166

file: '/Users/clairebromley/ClaireDataAnalysis/MATLAB/kymographUpDownWrapper.m'
name: 'kymographUpDownWrapper'
line: 4

Error: MATLAB:imagesci:imread:fileDoesNotExist: File "/Volumes/Arthur/DATA etc/CUTS/Vienna 1/DATA Vienna 1/Cut data/USE raw SORT/PUT BACK/240815_E15/000669_mix.tif" does not exist.

...

Date: 240815, Embryo: 14, cut: 3 file: '/Applications/MATLAB_R2014a.app/toolbox/matlab/imagesci/imread.m' name: 'imread' line: 349

file: '/Users/clairebromley/ClaireDataAnalysis/MATLAB/kymographBase.m'
name: 'kymographBase'
line: 166

file: '/Users/clairebromley/ClaireDataAnalysis/MATLAB/kymographUpDownWrapper.m'
name: 'kymographUpDownWrapper'
line: 4

Error: MATLAB:imagesci:imread:fileDoesNotExist: File "/Volumes/Arthur/DATA etc/CUTS/Vienna 1/DATA Vienna 1/Cut data/USE raw SORT/PUT BACK/240815_E14/001273_mix.tif" does not exist.