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clami66 / AF_unmasked

Source code and examples for AlphaFold Unmasked
Apache License 2.0
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conda installation failed #11

Open fabiotrovato opened 2 weeks ago

fabiotrovato commented 2 weeks ago

Hi, I tried to install the conda env on my macbook M3 Pro, but none of the commands suggested in the instructions worked conda env create --file=environment.yaml or mamba env create --file=environment.yaml or CONDA_SUBDIR=osx-64 conda env create --file=environment.yaml

The error is: Platform: osx-64 Collecting package metadata (repodata.json): done Solving environment: failed

PackagesNotFoundError: The following packages are not available from current channels:

clami66 commented 2 weeks ago

Hi,

It's quite hard to make AF work on apple products: AlphaFold has no support for macbooks - I'm pretty sure they have no CUDA capabilities - but you might be able to run on CPU only.

I don't have a way of testing this, but perhaps you could delete cudnn=8.2.1.32 and cuda-nvcc from the environment.yaml file and try again.

About kalign, you can try to change the line to kalign3 (without version). Alternatively, you can always try to install it separately (see instructions here)