search

claraqin / neonMicrobe

Processing NEON soil microbe marker gene sequence data into ASV tables.
GNU Lesser General Public License v3.0
9 stars 4 forks source link

Data folders #1

Closed KaiZhuPhD closed 4 years ago

KaiZhuPhD commented 5 years ago

@claraqin I suggest having two folders: data-raw and data. data-raw stores the data directly downloaded from NEON, etc. using code, and it is a symbolic link on the server and won't be uploaded to GitHub. data stores processed data that are needed to run the models, and should be relatively small and will be version-controlled on GitHub. For example, the rda files can be put in the data folder. That way, collaborators only need the GitHub repo without accessing the server.

claraqin commented 4 years ago

I resolved this issue in my latest commit