Make Diamond Database:
diamond makedb --in mobileOG-db-beatrix-1.X.All.faa -d mobileOG-db-beatrix-1.X.dmnd
I am not able to find mobileOG-db-beatrix-1.X.dmnd.
Should I have to first download diamond database to execute above command? or I am doing something wrong?
diamond makedb --in mobileOG-db-beatrix-1.X.All.faa -d mobileOG-db-beatrix-1.X.dmnd
Error is
diamond v2.0.15.153 (C) Max Planck Society for the Advancement of Science
Documentation, support and updates available at http://www.diamondsearch.org
Please cite: http://dx.doi.org/10.1038/s41592-021-01101-x Nature Methods (2021)
CPU threads: 40
Scoring parameters: (Matrix=BLOSUM62 Lambda=0.267 K=0.041 Penalties=11/1)
Database input file: mobileOG-db-beatrix-1.X.All.faa
Opening the database file... No such file or directory
[0s]
Error: Error calling stat on file mobileOG-db-beatrix-1.X.All.faa
Opening the database file... No such file or directory
[0s]
Please help in solving this error. Thank you.
I am stuck at this step.
Make Diamond Database: diamond makedb --in mobileOG-db-beatrix-1.X.All.faa -d mobileOG-db-beatrix-1.X.dmnd
I am not able to find mobileOG-db-beatrix-1.X.dmnd. Should I have to first download diamond database to execute above command? or I am doing something wrong? diamond makedb --in mobileOG-db-beatrix-1.X.All.faa -d mobileOG-db-beatrix-1.X.dmnd Error is diamond v2.0.15.153 (C) Max Planck Society for the Advancement of Science Documentation, support and updates available at http://www.diamondsearch.org Please cite: http://dx.doi.org/10.1038/s41592-021-01101-x Nature Methods (2021)
CPU threads: 40
Scoring parameters: (Matrix=BLOSUM62 Lambda=0.267 K=0.041 Penalties=11/1) Database input file: mobileOG-db-beatrix-1.X.All.faa Opening the database file... No such file or directory [0s] Error: Error calling stat on file mobileOG-db-beatrix-1.X.All.faa Opening the database file... No such file or directory [0s] Please help in solving this error. Thank you.