clbarnes connectome_paper issues

clbarnes / connectome_paper

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Re-run with master and no_dop56

#30 clbarnes opened 8 years ago
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Run undirected versions of metric plots

#29 clbarnes opened 8 years ago
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broken metrics

#28 clbarnes closed 8 years ago
1
Methods: Software

#27 clbarnes closed 8 years ago
2
Methods: Hive plots

#26 clbarnes closed 8 years ago
1
Methods: Network measures

#25 clbarnes closed 8 years ago
1
Results: Monoamines between physical modules

#24 clbarnes closed 8 years ago
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metric p-values in table

#23 clbarnes closed 8 years ago
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try to stick to ‘look’ of mock figure in current manuscript: large legible font, not too many annotations on figs (e.g. no p-values.

#22 clbarnes closed 8 years ago
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Add to sup mat if needed (?)

#21 clbarnes closed 8 years ago
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Add to methods where commented

#20 clbarnes closed 8 years ago
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Generate Fig panels with final colours (liaise with Barry)

#19 clbarnes closed 8 years ago
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numbers for the proportion of ma links that fall with or between modules of the physical network – compared to what one might expect by chance ie. if adding links to the physical network (a) at random (b) at random but with deg distribution of MA net

#18 clbarnes closed 8 years ago
1
compare gj-syn-ma to a randomized networks resulting from keeping real gj-syn and adding a randomized MA network preserving its degree distribution

#17 clbarnes opened 8 years ago
1
Try degree distribution with linlin instead of loglog

#16 clbarnes closed 8 years ago
0
Aesthetic changes

#15 clbarnes closed 8 years ago
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Change plot colours (metrics and hive plots)

#14 clbarnes closed 8 years ago
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Figure out data sharing w/ OpenWorm

#13 clbarnes opened 8 years ago
2
Fix colours to be sorted Dark2 for 4 etypes

#12 clbarnes closed 8 years ago
0
Add ordering for hive plot axes

#11 clbarnes closed 8 years ago
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Test config-dumping

#10 clbarnes closed 8 years ago
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add p values to metric plots for ud

#9 clbarnes closed 8 years ago
1
Repeat everything for MA network including weak

#8 clbarnes closed 8 years ago
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Repeat everything for unweighted directed

#7 clbarnes closed 8 years ago
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Separate global and nodewise metrics

#6 clbarnes closed 8 years ago
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Modularity

#5 clbarnes closed 8 years ago
1
Fix densities in control graphs

#4 clbarnes closed 9 years ago
2
Look into transitivity difference between AC/WW

#3 clbarnes closed 8 years ago
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Add p-value to global metrics

#2 clbarnes closed 8 years ago
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Work out exponent for power law degree distribution

#1 clbarnes closed 8 years ago
0