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GPU-accelerated image processing for everyone
https://clij.github.io/clij2
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Can't run ClijX richradson lucy deconvolution using clfft #66

Open Hark64 opened 11 months ago

Hark64 commented 11 months ago

When I try to run Clijx richardson lucy deconvolution, I get this exception. I am running Fiji in linux and the server I am on has two nvidia gpus and a cpu so I think this may be an issue of it trying to create a context for each of these three devices? Although I am not sure since I'm having trouble analyzing this error.

(Fiji Is Just) ImageJ 2.14.0/1.54f; Java 1.8.0_322 [64-bit]; Linux 3.10.0-1160.83.1.el7.x86_64; 913MB of 121978MB (<1%)

net.haesleinhuepf.clij.clearcl.exceptions.ClearCLTooManyContextsException: Too many contexts have been created and not released
    at net.haesleinhuepf.clij.clearcl.ClearCLDevice.createContext(ClearCLDevice.java:221)
    at net.haesleinhuepf.clij.CLIJ.<init>(CLIJ.java:156)
    at net.haesleinhuepf.clij.CLIJ.getInstance(CLIJ.java:172)
    at net.haesleinhuepf.clij.CLIJ.getInstance(CLIJ.java:166)
    at net.haesleinhuepf.clij.macro.AbstractCLIJPlugin.run(AbstractCLIJPlugin.java:265)
    at ij.plugin.filter.PlugInFilterRunner.processOneImage(PlugInFilterRunner.java:266)
    at ij.plugin.filter.PlugInFilterRunner.<init>(PlugInFilterRunner.java:114)
    at ij.IJ.runUserPlugIn(IJ.java:246)
    at ij.IJ.runPlugIn(IJ.java:210)
    at ij.Executer.runCommand(Executer.java:152)
    at ij.Executer.run(Executer.java:70)
    at java.lang.Thread.run(Thread.java:750)

`

haesleinhuepf commented 11 months ago

Hi @Hark64 ,

I've seen similar errors before. They are typically related to some software/driver installation. Would you mind trying the solutions discussed in these image.sc threads?

let us know if this helps!

best, Robert