NOAA CoRIS Data

[nickrsan]

https://www.coris.noaa.gov/search/catalog/search/browse/browse.page.

Suggested in a large email containing many urls

[ayaeau]

I'm attempting to copy this data now...Will update when I have it all and then again when I get it mirrored

[donbright]

seems non-simple, looks like a website that has clickable links to 2,800 resources, but not a straightforward wget ?

[ayaeau]

Thanks for commenting. This is a scramble and I jumped in earlier than I should have. Where can I find some info on how to be a better help in this effort?

FINISHED --2017-01-28 12:42:48-- Total wall clock time: 20h 57m 50s Downloaded: 2718 files, 73G in 18h 55m 6s (1.09 MB/s)

[donbright]

i am new as well, just curious as to what command you used to fetch the data? i couldn't figure it out.

[RoundWorld]

URLs from the catalog:

ftp://coast.noaa.gov/pub/DigitalCoast/lidar1_z/geoid12a/data/3669/ ftp://data.nodc.noaa.gov/pub/data.nodc/pathfinder/ ftp://ftp.aoml.noaa.gov/phod/pub/rsmith/VS_VP_Trans_Study/SUMMER_2010/CTD_data/ ftp://ftp.aoml.noaa.gov/phod/pub/rsmith/VS_VP_Trans_Study/SUMMER_2010/SADCP_transport_data/ ftp://ftp.aoml.noaa.gov/phod/pub/rsmith/VS_VP_Trans_Study/SUMMER_2010/moored_ADCP_data/ ftp://ftp.aoml.noaa.gov/pub/phod/rsmith/VS_VP_Trans_Study/moored_data/VS/VS2/ct/ascii/CT_VS2_01.asc ftp://ftp.aoml.noaa.gov/pub/phod/rsmith/VS_VP_Trans_Study/shipboard_data/GP2010A/ctd/ascii/ ftp://ftp.aoml.noaa.gov/pub/phod/rsmith/VS_VP_Trans_Study/shipboard_data/GP2010A/sadcp/ ftp://ftp.csc.noaa.gov/pub/crs/ccap/high_res/HI/hi_oahu_2005_ccap_hr_land_cover.zip ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/atlantic/barbados_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/east_pacific/bartolome_island_1995.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/east_pacific/champion_island_1995.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/east_pacific/clipperton_2b_2000.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/east_pacific/clipperton_3c_2000.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/east_pacific/clipperton_4b_2000.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/east_pacific/fanning_1995.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/east_pacific/kahe_point_1995.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/east_pacific/kiritimati_1998.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/east_pacific/palmyra_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/east_pacific/punta_pitt_1995.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/east_pacific/punta_pitt_1995b.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/east_pacific/rarotonga_2000.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/east_pacific/rarotonga_2000b.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/east_pacific/santa_cruz_1995.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/east_pacific/secas_1995.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/east_pacific/urvina_bay_1995.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/east_pacific/urvina_bay_1999.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/east_pacific/uva_island_1995.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/indian_ocean/houtman_abrolhos_1999.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/indian_ocean/mahe_1997.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/indian_ocean/malindi_2000.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/red_sea/aqaba_18_1995.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/red_sea/aqaba_19_1995.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/red_sea/ras_um_sid_2000.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/abraham_1994.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/amedee_1999.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/espiritu_santo_1994.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/abraham_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/agincourt_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/britomart_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/brook_island_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/burdekin_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/burkitt_island_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/cid_island_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/conical_rocks_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/coombe_island_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/darnley_island_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/dunk_island_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/flinders_rock_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/great_palm_island_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/havannah_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/hook_island_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/jeannie_river_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/kurrimine_beach_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/lodestone_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/low_isles_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/lupton_island_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/magnetic_island_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/masthead_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/north_molle_island_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/otter_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/pandora_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/pasco_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/red_wallis_island_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/rib_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/sanctuary_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/scawfell_island_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/snapper_island_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/south_molle_island_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/stanley_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/stonehaven_island_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/wheeler_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/great_barrier/yankee_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/maiana_2000.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/nauru_1999.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/nauru_1999b.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/papua_new_guinea/huon_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/papua_new_guinea/huon_terrace_i_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/papua_new_guinea/huon_terrace_iia1_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/papua_new_guinea/huon_terrace_iia2_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/papua_new_guinea/huon_terrace_iia3_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/papua_new_guinea/huon_terrace_iiib_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/papua_new_guinea/huon_terrace_v_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/papua_new_guinea/huon_terrace_vii1_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/papua_new_guinea/huon_terrace_vii2_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/papua_new_guinea/huon_terrace_vii3_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/papua_new_guinea/huon_terrace_viia1_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/papua_new_guinea/huon_terrace_viia2_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/papua_new_guinea/huon_terrace_viia3_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/papua_new_guinea/laing_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/papua_new_guinea/laing_terrace_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/papua_new_guinea/madang_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/papua_new_guinea/madang_terrace_2001.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/papua_new_guinea_1998.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/tarawa_1995.txt ftp://ftp.ncdc.noaa.gov/pub/data/paleo/coral/west_pacific/tasmaloum_2000.txt ftp://ftp.soest.hawaii.edu/pibhmc ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/bathymetry/NEB_20m.asc.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/bathymetry/NEB_20m.grd.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/bathymetry/NEB_5m.asc.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/bathymetry/NEB_5m.grd.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/bathymetry/Rose_40m.asc.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/bathymetry/Rose_40m.grd.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/bathymetry/Rose_5m.asc.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/bathymetry/Rose_5m.grd.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/bathymetry/SWA_DBALL_2m.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/bathymetry/SWA_DBMB_5m.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/bathymetry/Swains_10m.asc.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/bathymetry/Swains_10m.grd.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/bathymetry/Swains_40m.asc.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/bathymetry/Swains_40m.grd.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/bathymetry/Tau_5m.asc.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/bathymetry/Tau_5m.grd.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/bathymetry/Tau_w_10m.asc.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/bathymetry/Tau_w_10m.grd.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/bathymetry/Tutuila_5m.grd.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/bathymetry/Vailuluu_40m.asc.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/bathymetry/Vailuluu_40m.grd.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/benthichabitatlayers/Rose_40m_HardSoft.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/benthichabitatlayers/Rose_5m_BPIstructures.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/benthichabitatlayers/Rose_5m_BPIzones.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/benthichabitatlayers/Rose_5m_HardSoft.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/benthichabitatlayers/Rose_5m_rugosity.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/benthichabitatlayers/Rose_5m_slope.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/benthichabitatlayers/Swains_40m_BPIStructures.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/benthichabitatlayers/Swains_40m_BPIZones.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/benthichabitatlayers/Swains_40m_Rugosity.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/benthichabitatlayers/Swains_40m_Slope.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/benthichabitatlayers/Swains_40m_hardsoft.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/benthichabitatlayers/Tau_5m_BPIstructures.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/benthichabitatlayers/Tau_5m_BPIzones.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/benthichabitatlayers/Tau_5m_Rugosity.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/benthichabitatlayers/Tau_5m_Slope.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/benthichabitatlayers/ofu_5m_hs_int.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/benthichabitatlayers/ros_5m_hs_int.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/benthichabitatlayers/tau_5m_hs_int.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/optical/ofu/OFU_TOAD_ALL2_445.jpg ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/optical/ofu/ofu_toad_sb1216.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/optical/tau/TOAD_Tau_all2_445.jpg ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/optical/tau/tau_toad_sb1216.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/amsamoa/optical/tutuila/auv/auv_SE1202_fish_counts.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/backscatter/Gal_1m_backscat.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/backscatter/apra_ss_1m.rar ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/backscatter/rota/ ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/bathymetry/35_37fthm_5m.asc.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/bathymetry/FDM_5m_Bathymetry.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/bathymetry/Guam_5m_Bathymetry_mb&lidar.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/bathymetry/NorthMarianasCentral_60.grd.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/bathymetry/NorthMarianasNorth_60m.grd.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/bathymetry/NorthMarianasTransit_60m.grd.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/bathymetry/Rot_DBMB_5m.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/bathymetry/SAR_10m_DBMB.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/bathymetry/SMAR_60m.grd.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/bathymetry/agrihan_10m.grd.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/bathymetry/alamagan_10m.grd.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/bathymetry/apra_1m_grd.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/bathymetry/asuncion_10m.grd.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/bathymetry/gal_5m.asc.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/bathymetry/guam_5m.grd.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/bathymetry/guguan_10m.grd.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/bathymetry/marpi_5m.grd.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/bathymetry/maug_10m.grd.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/bathymetry/pagan_10m.grd.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/bathymetry/saipan_5m.grd.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/bathymetry/sarigan_10m.grd.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/bathymetry/supply_10m.grd.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/bathymetry/tinian_5m.grd.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/bathymetry/zea_5m.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/benthichabitatlayers/35_37fthm_5m_rug.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/benthichabitatlayers/35_37fthm_5m_slp.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/benthichabitatlayers/Apra_5m_Hardsoft.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/benthichabitatlayers/FDP_10m_BPIzones.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/benthichabitatlayers/apra_rug_1m.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/benthichabitatlayers/apra_slp_1m.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/benthichabitatlayers/asuncion_10m_BPIstructures.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/benthichabitatlayers/asuncion_10m_BPIzones.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/benthichabitatlayers/fdm_5m_bpis.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/benthichabitatlayers/fdm_5m_bpiz.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/benthichabitatlayers/fdm_5m_rug.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/benthichabitatlayers/fdm_5m_slp.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/benthichabitatlayers/gal_5m_BPIstructures.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/benthichabitatlayers/gal_5m_BPIzones.zip ftp://ftp.soest.hawaii.edu/pibhmc/website/data/cnmi-guam/benthichabitatlayers/gal_5m_Rugosity.zip 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http://cakex.org/virtual-library/oceans-and-marine-resources-changing-climate-technical-input-2013-national-climate-a http://ccma.nos.noaa.gov/ecosystems/coralreef/summit_sea/summit2seaPR.zip http://ccma.nos.noaa.gov/ecosystems/coralreef/summit_sea/summit2seaUSVI.zip http://ccma.nos.noaa.gov/ecosystems/coralreef/summit_sea/summit_sea2.aspx http://ccma.nos.noaa.gov/ecosystems/sanctuaries/fgb_nms/ http://cnmimmt.blogspot.com/ http://coast.noaa.gov/dataviewer/index.html?action=advsearch&qType=in&qFld=ID&qVal=3669 http://coast.noaa.gov/regions/pacific/ http://coastalscience.noaa.gov/ http://coastalscience.noaa.gov/about/centers/ccfhr http://coastalscience.noaa.gov/datasets/e102/data/MosaicsImagery_Tile_1.zip http://coastalscience.noaa.gov/datasets/e102/data/Palau_AccuracyAssessment.zip http://coastalscience.noaa.gov/datasets/e102/data/Palau_BenthicHabitat_Map.zip http://coastalscience.noaa.gov/datasets/e102/data/Palau_GroundValidation.zip 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https://data.nodc.noaa.gov/coris/library/NOAA/CRCP/project/684/EAFM_Plan_COC_2013.pdf https://data.nodc.noaa.gov/coris/library/NOAA/CRCP/project/684/ThomasHeron2011_CSIROSoutheastAsiaRapidResponse.pdf https://data.nodc.noaa.gov/coris/library/NOAA/CRCP/project/694/120827_Guam_Rain_Garden_Installation_Guide.pdf https://data.nodc.noaa.gov/coris/library/NOAA/CRCP/project/807/150522_ICA_Prioritization_Meeting_Summary.pdf https://data.nodc.noaa.gov/coris/library/NOAA/CRCP/project/807/SE_Florida_LBSP_Reduction_for_Reefs_NOAA_Jan_2015_with_Appx_A_B.pdf https://data.nodc.noaa.gov/coris/library/NOAA/CRCP/project/812/FINAL_NOAA_MOES_VI_Eval_Report_09_24_15.pdf https://data.nodc.noaa.gov/coris/library/NOAA/CRCP/project/812/MOES-VI_Final_Report_With_Appendices_A-D.pdf https://data.nodc.noaa.gov/coris/library/NOAA/CRCP/project/817/NOAA_Tech_Memo_PIFSC_43.pdf https://data.nodc.noaa.gov/coris/library/NOAA/CRCP/project/833/STXRecFish_Report_FINAL_1_15_2016.pdf https://data.nodc.noaa.gov/coris/library/NOAA/CRCP/project/850/SEFCRI_FIA_3_Year_Summary_Report-FINAL_SEP_02_2015.pdf https://data.nodc.noaa.gov/coris/library/NOAA/CRCP/project/851/CCAP_Workshop_Report_Final.pdf https://data.nodc.noaa.gov/coris/library/NOAA/CRCP/project/851/CRCP_CCSIP_Final.pdf https://data.nodc.noaa.gov/coris/library/NOAA/CRCP/project/915/TR_NESDIS_145.pdf https://data.nodc.noaa.gov/coris/library/NOAA/CRCP/project/915/WGIIAR5-PartA_FINAL.pdf https://data.nodc.noaa.gov/coris/library/NOAA/CRCP/project/915/WGIIAR5-PartB_FINAL.pdf https://data.nodc.noaa.gov/coris/library/NOAA/CRCP/project/917/20150930_Fagaalu_Rain_Garden_Clinic_Summary.pdf https://data.nodc.noaa.gov/coris/library/NOAA/CRCP/project/917/Fagaalu_TM_NOS_NCCOS_201.pdf https://data.nodc.noaa.gov/coris/library/NOAA/DSCRTP/Grants/NA09NMJF4410034/Cape_Canaveral_North/Cape_Canaveral_Deep_North_Site_Characterization.pdf 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[gabefair]

@ayaeau can you share a mirror or a host of the folder you have all these files in? Thanks

[markuslaker]

It should be possible to automate the downloading of a lot of these files. Anything ending in a slash is a directory and can be mirrored to local storage by lftp; anything ending in .zip, .txt or .xls is a usable file that can be directly downloaded by wget or, again, lftp. I'll knock together some code to do the job. It'll take me a few days, just because of the small amount of time I have available each day, but I expect to have it done by the end of the weekend. Then I'll depend on some kind person to run the code and download all the data, because I haven't the bandwidth or the storage capacity for a repository of this size. I will, of course, post source code, not binaries, so that you can see what the program does before you run it.

What I won't be able to automate are files ending in .htm, .html, .asp, aspx, .php and the like. These will produce Web pages that have the interesting data buried somewhere within them. Depending on how consistent they are or otherwise, automating that could well take more work that just clicking them one by one and downloading the data manually.

Anyway, watch this space. Code follows.

[markuslaker]

This is far from finished, but here's proof of life: https://github.com/markuslaker/getcoris. It compiles and works now, but isn't ready because it's not resumable: after any interruption, you have to start the downloads again from the first link. I'll finish it over the next few days, as work and private life allow. I'll post again here when the code is ready for you to download and run.

[markuslaker]

Right, come and get it: https://github.com/markuslaker/getcoris/blob/master/getcoris.d. Instructions are right there in the source file. I developed it on Debian Jessie, so it should work cleanly there (once you've installed the D compiler and lftp), but I'm also keen to hear about the experiences of users of other platforms. If you tell me what you did to get the program working on your machine, I'll add your tips to the instructions in the source code.

Downloads are shuffled. That means, if several of us start downloading now, and then some of the resources go away before we can all download them, we'll all end up with different subsets of the data, which we can merge at our leisure.

Many thanks for helping out,

Markus

[markuslaker]

I have a copy of getcoris.d running now. A significant number of items are 404 Not Found; a smaller number return 403 Forbidden:

msl@james:~/d/getcoris$ ./corisprogress.d | tail -1
Items downloaded: 181; failed or still downloading: 48
msl@james:~/d/getcoris$ du -sh
11G .
msl@james:~/d/getcoris$

That's a failure rate of more than 20%. It's impossible for me to say when these missing items were taken down and how many more may be taken down in the near future.

We shouldn't be misled by the item counts and the du numbers, BTW. getcoris.d uses four concurrent download threads. When it first starts up, item counts will rise rapidly until all four threads find something large to download; only then will used disk space increase significantly without much of a rise in item counts. So the total dataset is likely to be larger than these numbers imply, and larger than I can handle on my ageing home machine and ADSL subscription.

Markus

[markuslaker]

If you tackle this, remove http://www.cakex.org/sites/default/files/documents/Climate%20of%20the%20Southeast%20United%20States.pdf from your list of links. lftp gets stuck in an infinite redirection loop and never downloads everything. I don't know whether the other cakex link will be equally troublesome; I've not got to it yet.

If you're already running getcoris.d and you see from the console that you're stuck in a cakex redirection loop, open another console, run ps aux | grep lftp to identify the stuck lftp instance, and then use kill to kill it. getcoris.d will survive.