synchronize labels/comments with SEPIO owl file

clingen-data-model / clingen-interpretation

Allele (variant) interpretation model and API for ClinGen

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synchronize labels/comments with SEPIO owl file #174

Closed bpow closed 3 years ago

bpow commented 6 years ago

Long term goal is to have "single source of truth" between SEPIO owl file definitions and the definitions we show in our documentation.

I'm working on parsing out the rdfs:label, rdfs:comment and iao:definitions from the sepio owl files in preparation for this.

bpow commented 6 years ago

I've made some progress on this with 4be1f7e7.

There are some new ruby dependencies (rdf and rdf-rdfxml), so may need to run bundle install, but after that you should be able to run bundle exec ruby misc/parse_sepio_owl.rb and get a json dump of some of the annotations from the owl files.