clingen-data-model clinvar-gk-python issues - Githubissues

clingen-data-model / clinvar-gk-python

Project for reading and normalizing ClinVar variants into GA4GH GKS forms

MIT License

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Create a GKS transform dataset for Tristan.

#12 larrybabb opened 1 month ago
2
Add catvar_ndjsonifier and dockerfile for cloudrun that combines individual json files into one doc keyed by id

#11 theferrit32 closed 2 months ago
0
Demo notebooks

#10 theferrit32 closed 3 months ago
0
Create cloud run deployment for ClinVar GK File Generation

#9 theferrit32 opened 7 months ago
1
Multiprocessing and timeouts

#8 theferrit32 closed 6 months ago
4
Prevent runaway variant normalization when processing ClinVar releases

#7 toneillbroad closed 6 months ago
0
Create routine to combine categorical variations exported from BigQuery

#6 theferrit32 closed 6 months ago
1
clinvar-gk-pilot to use vrs-python w/ dependency on hgvs lib from 225-uncertain-ranges branch

#5 toneillbroad closed 6 months ago
1
Draft VA representation of Aggregate Classification (VCV)

#3 larrybabb opened 9 months ago
0
Re-establish working version of SCV data export from BQ

#2 larrybabb closed 7 months ago
1
Port original gk-pilot python logic to initiate

#1 larrybabb closed 9 months ago
2
Create an ClinVar AnyVar dataset

#4 larrybabb opened 9 months ago
1