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clingen-data-model / clinvar-ingest-reports

ClinGen generates several google sheet based reports from the ClinVar ingested data that originates from the Broad BigQuery data.
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Confirm ENIGMA BRCA1 and BRCA2 VCEP Variant Tracker pulling correct ClinVar submitter ID #95

Closed dazzariti closed 3 months ago

dazzariti commented 3 months ago

The ClinGen ENIGMA BRCA1 and BRCA2 VCEP submits under ClinVar submitter ID 509268 https://www.ncbi.nlm.nih.gov/clinvar/submitters/509268/

However, I think the VCEP Variant Tracker Report (RPT057) is pulling from the old ENIGMA ClinVar Expert Panel submitter Evidence-based Network for the Interpretation of Germline Mutant Alleles (ENIGMA); c/o QIMR Berghofer Medical Research Institute

I think there's confusion because both are listed in the ClinVar Report BQ Support Table (row 12 and row 65)

Row 65 is the one I'm interested in as it is the one formally approved to be a ClinGen VCEP - can you confirm that this report https://docs.google.com/spreadsheets/d/1an5UnFA6Gsjt8w0Y0yCds95ur-nPWpbUDtxEFipuxgs/edit?usp=sharing is using Organization ID: 509268? Based on the data in the Alerts tab, I think it's coming from https://www.ncbi.nlm.nih.gov/clinvar/submitters/504863/

Thanks!

RyanFWebb commented 3 months ago

Apologies for the mixup! The sheet is now reporting on Organization ID: 509268.

dazzariti commented 3 months ago

Thanks!