Defining = "tally" and "value"

[jimmyzhen]

"tally": "0.5"

https://github.com/clingen-data-model/data-exchange-shared-json/blob/87fa6290e08a78d16eb022a487a1c8254dd1603e/json-structure-phase1/Gene%20Curation%20Interface/gci.json#L56

@sgoehringer what does this value represent? Is it the default score?

Also, is "value" the score the curator gave it?

thx!

[sgoehringer]

@jimmyzhen Correct, the value is what the curator assigned (ie, Variant is de novo = 14). But since the guidelines state the the max score for Variant is de novo is 12 the tally would be sent as 12. IF the Variant is de novo was curated as 6 the tally would be sent as 6 because it is less than the max score. This is also helpful in the areas where two values need to be add into a single tally (with a max) such as the Autosomal Recessive Disease section.

Does this help?

[jimmyzhen]

@sgoehringer It sounds like the value is the combined score of the same variant type and the tally is a computed value based on whether the combined score is less or greater than the max score.

[sgoehringer]

@jimmyzhen That sounds right! Do you plan on sharing both values?

[sgoehringer]

Cleanup - Closing old issue.