clingen-data-model / data-exchange-shared-json

JSON schema utilized to share data from the curation interfaces into the Data Exchange. CONTAINS GENE EXPRESS JSON DATA
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Add new fields data model for segregation LOD score data in revised SOP #31

Closed jimmyzhen closed 4 years ago

jimmyzhen commented 6 years ago

Given the updated segregation LOD score data shown in the classification matrix, we will need to include the new key/value pairs in the Kafka messages streamed to Data Exchange.

The new fields are for:

  1. Total count for candidate evidence
  2. Total count for exome evidence
  3. Sum of all candidate LOD scores
  4. Sum of all exome LOD scores
  5. Total sum of all LOD scores
cbizon commented 6 years ago

Here's how we do this in the data exchange model, perhaps you will find it useful: http://dataexchange.clinicalgenome.org/interpretation/entities/FamilyCosegregationStatement.html http://dataexchange.clinicalgenome.org/interpretation/entities/AggregateCosegregationStatement.html

jimmyzhen commented 6 years ago

Thanks for the pointers, @cbizon!

sgoehringer commented 4 years ago

Cleanup - Closing old issue.