clingen-data-model / genegraph

Presents an RDF triplestore of gene information using GraphQL APIs
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Monitor beginning of month deployments to Clinvar FTP Site #749

Closed toneillbroad closed 1 year ago

toneillbroad commented 1 year ago

Monitor beginning of month deployments to Clinvar FTP Site to determine the files Clinvar releases there.

For the month of February there was a noticeable delay in files being released to the weekly file directory. A few days into the month 2 files showed up: ClinVarVariationRelease_00-latest_weekly.xml.gz ClinVarVariationRelease_00-latest_weekly.xml.gz.md5

But normally (I think) these files should be linked to files already in the directory

Parent Directory -
ClinVarVariationRelease_00-latest_weekly.xml.gz 2,930,856,918 2023-02-26 16:29:55 2023-02-26 16:29:55 ClinVarVariationRelease_00-latest_weekly.xml.gz.md5 139 2023-02-26 16:30:22 2023-02-26 16:30:22 ClinVarVariationRelease_2023-0213.xml.gz 2,929,333,690 2023-02-15 12:20:44 2023-02-15 12:20:44 ClinVarVariationRelease_2023-0213.xml.gz.md5 132 2023-02-15 12:20:59 2023-02-15 12:20:59 ClinVarVariationRelease_2023-0218.xml.gz 2,930,762,486 2023-02-19 10:18:18 2023-02-19 10:18:18 ClinVarVariationRelease_2023-0218.xml.gz.md5 132 2023-02-19 10:18:31 2023-02-19 10:18:31 ClinVarVariationRelease_2023-0226.xml.gz 2,930,856,918 2023-02-26 16:29:55 2023-02-26 16:29:55 ClinVarVariationRelease_2023-0226.xml.gz.md5 132 2023-02-26 16:30:12 2023-02-26 16:30:12

Notice that the file size of ClinVarVariationRelease_00-latest_weekly.xml.gz directly matches ClinVarVariationRelease_2023-0226.xml.gz indicatting that the former is llinked to the latter.

Need to determine if February was an anomoly or not.