clinicalml / large-scale-temporal-shift-study

Code for Large-Scale Study of Temporal Shift in Health Insurance Claims. Christina X Ji, Ahmed M Alaa, David Sontag. CHIL, 2023. https://arxiv.org/abs/2305.05087
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No version argument in data extraction scripts #1

Open egillax opened 1 year ago

egillax commented 1 year ago

In replace_zeros_with_null_in_measurement.py there is no version argument as is mentioned in the guide:

To identify measurements with value 0 that should be null and replace them with null, first get a preliminary version of the reference ranges by running python3 replace_zeros_with_null_in_measurement.py --createtable=range{direction} --version=[int] to produce cdm_measurementaux.measurement{direction}_references, a table with the most likely reference range for each measurement concept. Set {direction} to low and high.