Open Crispae opened 10 months ago
Are you trying to run Odinson with the BioNLPProcessor for annotating text? If so, I have recently set that up and can potentially help.
Thanks @bgyori that would be really great.
@bgyori if implementation is in your repo, please provide the link?
Thanks, @bgyori. That would be very welcome.
Thanks @bgyori it works!
Steps:
.aggregate(processors, main, causalAssembly, export, bioresources)
in root
of reach build.sbt
publishLocal
. Publish local will compile and build file of reach-processor and store it in ~/.ivy2/local/
.odinson-api
from dart-clulab, for your project then, add following dependencies.
libraryDependencies ++= Seq(
"com.twosixlabs.dart" %% "odinson-api" % "3.0.16",
"org.clulab" %% "reach-processors" % "1.6.3-SNAPSHOT")
in your project build.sbt
import org.clulab.processors.bionlp.BioNLPProcessor
Hi, I am trying to integrate bionlp processors from reach in odinson. With sbt i tried to load the dependency using this
I am using odinson-api from dart , and integrating bionlp processors in it, but could not import it. While importing,
While inspecting the error, it looks like follow transitive dependency because when we include
as dependency, it pulls in not only the 'reach-main' JAR but also its transitive dependencies specified in its POM file
But it's is not able locate this file.
can you please look into this issue. I am using scalaVersion= 2.12.7 and sbt.version=1.9.6
Thank you, for this project