cmap / cmapPy

Assorted tools for interacting with .gct, .gctx files and other Connectivity Map (Broad Institute) data/tools
https://clue.io/cmapPy/index.html
BSD 3-Clause "New" or "Revised" License
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better_parse_error #41

Closed adofficer closed 6 years ago

adofficer commented 6 years ago

Adding some more description to what is going wrong with the GCT file parsing. Check the wording to make sure it works with what you'd like.

This script no longer prints the row/col metadata and data numbers and instead shows expected and received dimensions of the full GCT file. Expected metadata numbers are not as useful when tracking down GCT parsing problems as the overall shape of the parsed file is.

oena commented 6 years ago

Thanks!