write_gct capable of writing invalid GCToo objects

cmap / cmapPy

Assorted tools for interacting with .gct, .gctx files and other Connectivity Map (Broad Institute) data/tools

https://clue.io/cmapPy/index.html

BSD 3-Clause "New" or "Revised" License

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Closed dedavison closed 5 years ago

dedavison commented 5 years ago

parse contains following assertion

assert full_df.shape == (num_col_metadata + num_data_rows + 1,
num_row_metadata + num_data_cols + 1)

while writer does not apply any such assertion

oena commented 5 years ago

fixed.