make error for linux @ cbaakman

[K-kiran90]

error: #warning is a GCC extension [-Werror] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~ /home/kiran/Downloads/boost_1_81_0/boost/include/boost/math/tools/config.hpp:23:6: error: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Werror=cpp]

[K-kiran90]

base) kiran@kiran-B360M-DS3H:~/Downloads/hssp-3.1.5$ make make all-am make[1]: Entering directory '/home/kiran/Downloads/hssp-3.1.5' depbase=echo src/fasta.o | sed 's|[^/]*$|.deps/&|;s|\.o$||';\ g++ -DHAVE_CONFIG_H -I. -std=c++11 -pedantic -Wall -Werror -Wno-reorder -pthread -I/home/kiran/Downloads/boost_1_81_0/boost/include -I./src/ -g -O2 -MT src/fasta.o -MD -MP -MF $depbase.Tpo -c -o src/fasta.o src/fasta.cpp &&\ mv -f $depbase.Tpo $depbase.Po In file included from /home/kiran/Downloads/boost_1_81_0/boost/include/boost/math/quaternion.hpp:14, from src/primitives-3d.h:16, from src/structure.h:11, from src/fasta.cpp:2: /home/kiran/Downloads/boost_1_81_0/boost/include/boost/math/tools/config.hpp:23:6: error: #warning is a GCC extension [-Werror] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~ /home/kiran/Downloads/boost_1_81_0/boost/include/boost/math/tools/config.hpp:23:6: error: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Werror=cpp] cc1plus: all warnings being treated as errors make[1]: [Makefile:661: src/fasta.o] Error 1 make[1]: Leaving directory '/home/kiran/Downloads/hssp-3.1.5' make: [Makefile:472: all] Error 2

[K-kiran90]

Please help me to resolve this

[K-kiran90]

@cbaakman Can you help me to figure out ASAP

[K-kiran90]

Also unable to get latest windows version of DSSP

[cbaakman]

It seems that boost wants you to use c++14 language standard, but the version used is c++11. I just changed that in the config.

For the latest version of DSSP, check here: https://github.com/PDB-REDO/dssp

[K-kiran90]

Can you please share me the windows DSSP4 version i.e., DSSP4.exe file

I found many errors when I installed the following link you shared with me.

On Mon, Mar 6, 2023 at 3:43 PM cbaakman @.***> wrote:

It seems that boost wants you to use c++14 language standard, but the version used is c++11. I'm not sure why your configuration chooses that standard. Upgrading gcc might help.

For the latest version of DSSP, check here: https://github.com/PDB-REDO/dssp

— Reply to this email directly, view it on GitHub https://github.com/cmbi/hssp/issues/132#issuecomment-1455848620, or unsubscribe https://github.com/notifications/unsubscribe-auth/AOHUEVCZ2V566EL3XSNDGNDW2W2FVANCNFSM6AAAAAAVQ4JK7A . You are receiving this because you authored the thread.Message ID: @.***>

[cbaakman]

I don't have the DSSP4 exe for windows, sorry. I think you should discuss this with the maintainers of DSSP4.

https://github.com/pdb-redo/dssp

[Xinyue-M]

Hi!

I met the same error when installing dssp and boost, and I solved it in this way: This error is due to the unmatching version of C++, as the version for boost should be c++14, but in the makefile of dssp, the default is c++11. First, you should check the c++ version in your own system, by print __cplusplus. The more detail can be accessed easily in search engine. After checking that you got c++14 in your system, you can change the config in Makefile in the directory of hssp: Replace '-std=c++11' as '-std=c++14'. Then you can use the command make to install.

Hope this is helpful!