cmdcolin mafviewer issues

cmdcolin / mafviewer

A JBrowse plugin to view multiple alignment format (MAF) files

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issues

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Failed to load resource: MAFViewer/main.

#26 span615 opened 1 year ago
4
Need to restart setup.sh?

#25 span615 opened 1 year ago
0
The maf file cannot be converted to bed format correctly

#24 bio-xtt closed 1 year ago
5
How to install in JBrowse 2 desktop app?

#23 thuynnguyen closed 10 months ago
15
I get the error "Too much data...chunk size xxxxx exceeds chunkSizeLimit"

#22 zhangya01 opened 3 years ago
1
Add support for HAL format

#21 cmdcolin opened 3 years ago
0
missing sequences in the visualization

#20 AndreaGuarracino closed 3 years ago
4
Error when adding as plugin to JBrowse 1.16

#19 subwaystation closed 3 years ago
14
Usage questions

#18 hexylena closed 5 years ago
11
Gaps in reference undisplayed

#17 cmdcolin opened 5 years ago
0
When zoomed out very far, the drawn boxes are smaller than they should be

#16 cmdcolin closed 6 years ago
0
Re-enable mouseover

#15 cmdcolin opened 6 years ago
1
Inverted the logic for mismatched base colors to std SNP style

#14 petersbr closed 6 years ago
3
Feature Request: Color Mismatches by bases

#13 petersbr closed 6 years ago
7
Support bigMaf format

#12 cmdcolin closed 6 years ago
1
alter color scheme for adjacent alignment blocks

#11 rdhayes opened 7 years ago
3
Adopt some UCSC connector conventions (single/double line)

#10 cmdcolin opened 7 years ago
1
mafviewer & JBrowseDesktop.app

#9 chlangley closed 7 years ago
17
MAF Track Not Showing Up

#8 ifreecell closed 7 years ago
1
Does not work well if there are overlapping alignment fragments

#7 cmdcolin opened 7 years ago
5
Handle very long alignments

#6 cmdcolin closed 7 years ago
1
Verify calculations and/or optimize

#5 cmdcolin closed 7 years ago
1
Allow linking out to other species with click actions

#4 cmdcolin opened 7 years ago
0
Empty outputs when using Mafviewer

#3 cganote closed 7 years ago
10
Support additional MAF directives

#2 cmdcolin opened 7 years ago
0
Show base pairs when zoomed in enough

#1 cmdcolin closed 7 years ago
4