Hi,
Add an option for circular chromosome to compute coverage at the edge using the geometry of the chromosome. The method consist in extending the depth array to have pseudo circular array and use it to compute the sliding windows and truncate redundant NA index at the end and the beginning.
Add tests for covhist and covplot function circular sets to true.
Add a .gitignore file.
Amaury
Hi, Add an option for circular chromosome to compute coverage at the edge using the geometry of the chromosome. The method consist in extending the depth array to have pseudo circular array and use it to compute the sliding windows and truncate redundant NA index at the end and the beginning. Add tests for covhist and covplot function circular sets to true. Add a .gitignore file. Amaury