Fix parameter name passed in `visualize` for showing ports

cmelab / grits

A toolkit for working with coarse-grain systems

https://grits.readthedocs.io

GNU General Public License v3.0

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Fix parameter name passed in `visualize` for showing ports #70

Closed chrisjonesBSU closed 8 months ago

chrisjonesBSU commented 8 months ago

It looks like parmed changed one of their parameter names from show_ports to include_ports. This PR fixes this. We keep the show_ports parameter name in GRiTS (same as mbuild), but this changes the parameter used when calling .save