Right now, the e_factor variable isn't actually doing anything. Based on how its used in planckton, I think all that is happening is that it is scaling the non-bonded LJ params. If this is the case, then we can iterate over the parmed object and scale them there. Need to double check first.
Right now, the e_factor variable isn't actually doing anything. Based on how its used in planckton, I think all that is happening is that it is scaling the non-bonded LJ params. If this is the case, then we can iterate over the parmed object and scale them there. Need to double check first.