Failure in test-bcRegressOut.R messages

[mj-jimenez]

• [x] Failure (test-bcRegressOut.R:249): messages

testthat::capture_messages(...) (`actual`) not equal to c(...) (`expected`).

lines(actual[[2]]) vs lines(expected[[2]])
- "No NaN values were found in bc@normalized. No imputation needed."
+ "Imputing normalized BCS..."
  ""

• [x] Failure (test-bcRegressOut.R:260): messages

testthat::capture_messages(...) (`actual`) not equal to c(...) (`expected`).

lines(actual[[2]]) vs lines(expected[[2]])
- "No NaN values were found in bc@normalized. No imputation needed."
+ "Imputing normalized BCS..."
  ""

lines(actual[[4]]) vs lines(expected[[4]])
- "No NaN values were found in bc@background. No imputation needed."
+ "Imputing background BCS..."
  ""

• [x] Failure (test-bcRegressOut.R:270): messages

testthat::capture_messages(...) (`actual`) not equal to c(...) (`expected`).

lines(actual[[2]]) vs lines(expected[[2]])
- "No NaN values were found in bc@normalized. No imputation needed."
+ "Imputing normalized BCS..."
  ""

lines(actual[[4]]) vs lines(expected[[4]])
- "No NaN values were found in bc@background. No imputation needed."
+ "Imputing background BCS..."
  ""

• [x] Failure (test-bcRegressOut.R:285): messages

testthat::capture_messages(...) (`actual`) not equal to c(...) (`expected`).

lines(actual[[2]]) vs lines(expected[[2]])
- "No NaN values were found in bc@normalized. No imputation needed."
+ "Imputing normalized BCS..."
  ""

lines(actual[[6]]) vs lines(expected[[6]])
- "No NaN values were found in bc@background. No imputation needed."
+ "Imputing background BCS..."
  ""

• [x] Failure (test-bcRegressOut.R:301): messages

testthat::capture_messages(...) (`actual`) not equal to c(...) (`expected`).

lines(actual[[1]]) vs lines(expected[[1]])
- "Computing background BCS using DSS signatures..."
+ "Background BCS already computed. Skipping this step."
  ""

lines(actual[[2]]) vs lines(expected[[2]])
- "No NaN values were found in bc@normalized. No imputation needed."
+ "Imputing normalized BCS..."
  ""

lines(actual[[6]]) vs lines(expected[[6]])
- "No NaN values were found in bc@background. No imputation needed."
+ "Imputing background BCS..."
  ""

• [x] Failure (test-bcRegressOut.R:314): messages

testthat::capture_messages(...) (`actual`) not equal to c(...) (`expected`).

lines(actual[[2]]) vs lines(expected[[2]])
- "Computing background BCS using DSS signatures..."
+ "Background BCS already computed. Skipping this step."
  ""

lines(actual[[3]]) vs lines(expected[[3]])
- "No NaN values were found in bc@normalized. No imputation needed."
+ "Imputing normalized BCS..."
  ""

lines(actual[[5]]) vs lines(expected[[5]])
- "No NaN values were found in bc@background. No imputation needed."
+ "Imputing background BCS..."
  ""

• [x] Failure (test-bcRegressOut.R:353): messages

testthat::capture_messages(...) (`actual`) not equal to c(...) (`expected`).

lines(actual[[4]]) vs lines(expected[[4]])
- "No NaN values were found in bc@background. No imputation needed."
+ "Imputing background BCS..."
  ""

• [x] Failure (test-bcRegressOut.R:380): messages

testthat::capture_messages(...) (`actual`) not equal to c(...) (`expected`).

lines(actual[[6]]) vs lines(expected[[6]])
- "No NaN values were found in bc@background. No imputation needed."
+ "Imputing background BCS..."
  ""

• [x] Failure (test-bcRegressOut.R:396): messages

testthat::capture_messages(...) (`actual`) not equal to c(...) (`expected`).

lines(actual[[1]]) vs lines(expected[[1]])
- "Computing background BCS using DSS signatures..."
+ "Background BCS already computed. Skipping this step."
  ""

• [x] Failure (test-bcRegressOut.R:409): messages

testthat::capture_messages(...) (`actual`) not equal to c(...) (`expected`).

lines(actual[[1]]) vs lines(expected[[1]])
- "DSS background not computed. The imputation will be computed with just the drugs (not pathways) in the beyondcell object."
+ "Background BCS already computed. Skipping this step."
  ""

lines(actual[[6]]) vs lines(expected[[6]])
- "No NaN values were found in bc@background. No imputation needed."
+ "Imputing background BCS..."
  ""