Update beyondcell recipe

cnio-bu / beyondcell

Beyondcell is a computational methodology for identifying tumour cell subpopulations with distinct drug responses in single-cell RNA-seq and Spatial Transcriptomics data.

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Update beyondcell recipe #84

Closed SGMartin closed 1 year ago

SGMartin commented 1 year ago

Once we have replaced the dependencies with built-in functions or tidyverse functions, we should

Remove:

qusages
bnstruct
see
useful
plyr
ggplot2

Upgrade:

Seurat

Add:

tidyverse

SGMartin commented 1 year ago

Closed with #101 in developing