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cnobles / iGUIDE

Bioinformatic pipeline for identifying dsDNA breaks by marker based incorporation, such as breaks induced by designer nucleases like Cas9.
https://iguide.readthedocs.io/en/latest/
GNU General Public License v3.0
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Optional UMItags #47

Closed ressy closed 5 years ago

ressy commented 5 years ago

For cases where UMItags are disabled in the config, this changes the rule includes to supply empty umitag .stat files for downstream processing, and conditionally excludes the umitags.reads column in the Read attrition table. Fixes #42.

cnobles commented 5 years ago

Closing as modifications are not included in #49.

ressy commented 5 years ago

Nice, it even understood my commits ended up merging in via additional-umitag-mods. Thanks Chris.