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cnobles / iGUIDE

Bioinformatic pipeline for identifying dsDNA breaks by marker based incorporation, such as breaks induced by designer nucleases like Cas9.
https://iguide.readthedocs.io/en/latest/
GNU General Public License v3.0
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Setup skip demux #51

Closed cnobles closed 5 years ago

cnobles commented 5 years ago

Setup an architecture for the pipeline that will accept skipping the demultiplexing step. This requires toggling a setting in the config and formatting the input reads in the correct naming scheme, but otherwise works just as well.