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cnobles / iGUIDE

Bioinformatic pipeline for identifying dsDNA breaks by marker based incorporation, such as breaks induced by designer nucleases like Cas9.
https://iguide.readthedocs.io/en/latest/
GNU General Public License v3.0
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SAM-output based aligners #60

Closed cnobles closed 5 years ago

cnobles commented 5 years ago

This update allows the user to select BWA as an alternative to BLAT in the config file. Additionally though, iGUIDE can now more easily be developed for other SAM/BAM-output aligners.