Pipeline fails using multihits (typo in code)

cnobles / iGUIDE

Bioinformatic pipeline for identifying dsDNA breaks by marker based incorporation, such as breaks induced by designer nucleases like Cas9.

https://iguide.readthedocs.io/en/latest/

GNU General Public License v3.0

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Pipeline fails using multihits (typo in code) #82

Open ShanSabri opened 3 years ago

ShanSabri commented 3 years ago

Error arises when iGUIDE/tools/rscripts/assimilate_incorp_data.R is called when recoverMultihits = TRUE.

Error:

Error in stri_detect_regex(string, pattern, opts_regex = opts(pattern)) :
  object 'mulithit_files' not found
Calls: <Anonymous> -> stri_detect_regex
Execution halted

Solution fixing this line (args$multihit --> args$multihits)

cnobles commented 3 years ago

Great catch, I'll work this in soon.