Add missing steps to resequencing-mem pipeline - Githubissues

cnr-ibba / nf-resequencing-mem

Nextflow resequencing pipeline with bwa-mem and freebayes

MIT License

0 stars 0 forks source link

Add missing steps to resequencing-mem pipeline #1

Closed bunop closed 3 years ago

bunop commented 3 years ago

[x] add trimming step (~~Trimmomatic~~ / Trimgalore / ~~cutadapt~~?)
[x] add snp calling step