:arrow_up: upgrade module dependencies and test for `-stub` option

cnr-ibba / nf-resequencing-mem

Nextflow resequencing pipeline with bwa-mem and freebayes

MIT License

0 stars 0 forks source link

Closed bunop closed 8 months ago

bunop commented 10 months ago

[x] update module dependencies
[x] update custom module dependencies
[x] remove the enable_conda params / or remove conda support
[x] fix changed steps
[x] fix the default container registry for custom modules (prepend docker.io to container URL)
[ ] test for -stub option